breast-cancer-mlflow
machine-learning timeout 44 turns 1172s 44 tool calls
reconstructed
TBLite drops the in‑progress transcript when it kills a timing‑out task.
The events below were captured turn‑by‑turn by the agent‑loop patch
and pieced back together — full content, reasoning, and tool calls are
all real; they just came from a different stream than the other tasks.
turn 1 · tool · process
{"processes": []}
turn 1 · assistant 12.8s api
→ process({"action": "list"})
turn 2 · tool · terminal
{"output": "total 28\ndrwxr-xr-x 1 root root 4096 Mar 4 09:20 .\ndrwxr-xr-x 1 root root 4096 Apr 22 18:07 ..\ndrwxr-xr-x 2 root root 4096 Mar 4 09:20 api\ndrwxr-xr-x 1 root root 4096 Mar 4 09:20 data\ndrwxr-xr-x 3 root root 4096 Mar 4 09:20 mlflow\ndrwxr-xr-x 2 root root 4096 Mar 4 09:20 output\n-rwxr-xr-x 1 root root 212 Mar 4 09:20 start.sh", "exit_code": 0, "error": null}
turn 2 · assistant 4.2s api
→ terminal({"command": "ls -la /app/"})
turn 3 · tool · terminal
{"output": "total 136\ndrwxr-xr-x 1 root root 4096 Mar 4 09:20 .\ndrwxr-xr-x 1 root root 4096 Mar 4 09:20 ..\ndrwxr-xr-x 2 root root 4096 Mar 4 09:20 submission\n-rw-rw-r-- 1 root root 72424 Mar 4 09:05 test.csv\n-rw-rw-r-- 1 root root 48762 Mar 4 09:05 train.csv", "exit_code": 0, "error": null}
turn 3 · assistant 11.3s api
→ terminal({"command": "ls -la /app/data/"})
turn 4 · tool · read_file
{"content": " 1|mean radius,mean texture,mean perimeter,mean area,mean smoothness,mean compactness,mean concavity,mean concave points,mean symmetry,mean fractal dimension,radius error,texture error,perimeter error,area error,smoothness error,compactness error,concavity error,concave points error,symmetry error,fractal dimension error,worst radius,worst texture,worst perimeter,worst area,worst smoothness,worst compactness,worst concavity,worst concave points,worst symmetry,worst fractal dimension,target\n 2|12.99,14.23,84.08,514.3,0.09462,0.09965,0.03738,0.02098,0.1652,0.07238,0.1814,0.6412,0.9219,14.41,0.005231,0.02305,0.03113,0.007315,0.01639,0.005701,13.72,16.91,87.38,576.0,0.1142,0.1975,0.145,0.0585,0.2432,0.1009,1\n 3|16.16,21.54,106.2,809.8,0.1008,0.1284,0.1043,0.05613,0.216,0.05891,0.4332,1.265,2.844,43.68,0.004877,0.01952,0.02219,0.009231,0.01535,0.002373,19.47,31.68,129.7,1175.0,0.1395,0.3055,0.2992,0.1312,0.348,0.07619,0\n 4|9.876,19.4,63.95,298.3,0.1005,0.09697,0.06154,0.03029,0.1945,0.06322,0.1803,1.222,1.528,11.77,0.009058,0.02196,0.03029,0.01112,0.01609,0.00357,10.76,26.83,72.22,361.2,0.1559,0.2302,0.2644,0.09749,0.2622,0.0849,1\n 5|11.62,18.18,76.38,408.8,0.1175,0.1483,0.102,0.05564,0.1957,0.07255,0.4101,1.74,3.027,27.85,0.01459,0.03206,0.04961,0.01841,0.01807,0.005217,13.36,25.4,88.14,528.1,0.178,0.2878,0.3186,0.1416,0.266,0.0927,1\n 6|13.0,25.13,82.61,520.2,0.08369,0.05073,0.01206,0.01762,0.1667,0.05449,0.2621,1.232,1.657,21.19,0.006054,0.008974,0.005681,0.006336,0.01215,0.001514,14.34,31.88,91.06,628.5,0.1218,0.1093,0.04462,0.05921,0.2306,0.06291,1\n 7|13.74,17.91,88.12,585.0,0.07944,0.06376,0.02881,0.01329,0.1473,0.0558,0.25,0.7574,1.573,21.47,0.002838,0.01592,0.0178,0.005828,0.01329,0.001976,15.34,22.46,97.19,725.9,0.09711,0.1824,0.1564,0.06019,0.235,0.07014,1\n 8|7.691,25.44,48.34,170.4,0.08668,0.1199,0.09252,0.01364,0.2037,0.07751,0.2196,1.479,1.445,11.73,0.01547,0.06457,0.09252,0.01364,0.02105,0.007551,8.678,31.89,54.49,223.6,0.1596,0.3064,0.3393,0.05,0.279,0.1066,1\n 9|14.29,16.82,90.3,632.6,0.06429,0.02675,0.00725,0.00625,0.1508,0.05376,0.1302,0.7198,0.8439,10.77,0.003492,0.00371,0.004826,0.003608,0.01536,0.001381,14.91,20.65,94.44,684.6,0.08567,0.05036,0.03866,0.03333,0.2458,0.0612,1\n 10|12.07,13.44,77.83,445.2,0.11,0.09009,0.03781,0.02798,0.1657,0.06608,0.2513,0.504,1.714,18.54,0.007327,0.01153,0.01798,0.007986,0.01962,0.002234,13.45,15.77,86.92,549.9,0.1521,0.1632,0.1622,0.07393,0.2781,0.08052,1\n 11|11.43,17.31,73.66,398.0,0.1092,0.09486,0.02031,0.01861,0.1645,0.06562,0.2843,1.908,1.937,21.38,0.006664,0.01735,0.01158,0.00952,0.02282,0.003526,12.78,26.76,82.66,503.0,0.1413,0.1792,0.07708,0.06402,0.2584,0.08096,1\n 12|8.219,20.7,53.27,203.9,0.09405,0.1305,0.1321,0.02168,0.2222,0.08261,0.1935,1.962,1.243,10.21,0.01243,0.05416,0.07753,0.01022,0.02309,0.01178,9.092,29.72,58.08,249.8,0.163,0.431,0.5381,0.07879,0.3322,0.1486,1\n 13|12.46,24.04,83.97,475.9,0.1186,0.2396,0.2273,0.08543,0.203,0.08243,0.2976,1.599,2.039,23.94,0.007149,0.07217,0.07743,0.01432,0.01789,0.01008,15.09,40.68,97.65,711.4,0.1853,1.058,1.105,0.221,0.4366,0.2075,0\n 14|12.18,14.08,77.25,461.4,0.07734,0.03212,0.01123,0.005051,0.1673,0.05649,0.2113,0.5996,1.438,15.82,0.005343,0.005767,0.01123,0.005051,0.01977,0.0009502,12.85,16.47,81.6,513.1,0.1001,0.05332,0.04116,0.01852,0.2293,0.06037,1\n 15|14.59,22.68,96.39,657.1,0.08473,0.133,0.1029,0.03736,0.1454,0.06147,0.2254,1.108,2.224,19.54,0.004242,0.04639,0.06578,0.01606,0.01638,0.004406,15.48,27.27,105.9,733.5,0.1026,0.3171,0.3662,0.1105,0.2258,0.08004,1\n 16|8.888,14.64,58.79,244.0,0.09783,0.1531,0.08606,0.02872,0.1902,0.0898,0.5262,0.8522,3.168,25.44,0.01721,0.09368,0.05671,0.01766,0.02541,0.02193,9.733,15.67,62.56,284.4,0.1207,0.2436,0.1434,0.04786,0.2254,0.1084,1\n 17|14.06,17.18,89.75,609.1,0.08045,0.05361,0.02681,0.03251,0.1641,0.05764,0.1504,1.685,1.237,12.67,0.005371,0.01273,0.01132,0.009155,0.01719,0.001444,14.92,25.34,96.
turn 4 · assistant 8.3s api
→ read_file({"path": "/app/data/train.csv", "limit": "20.0"})
turn 5 · tool · read_file
{"content": " 1|mean radius,mean texture,mean perimeter,mean area,mean smoothness,mean compactness,mean concavity,mean concave points,mean symmetry,mean fractal dimension,radius error,texture error,perimeter error,area error,smoothness error,compactness error,concavity error,concave points error,symmetry error,fractal dimension error,worst radius,worst texture,worst perimeter,worst area,worst smoothness,worst compactness,worst concavity,worst concave points,worst symmetry,worst fractal dimension\n 2|12.31,16.52,79.19,470.9,0.09172,0.06829,0.03372,0.02272,0.172,0.05914,0.2505,1.025,1.74,19.68,0.004854,0.01819,0.01826,0.007965,0.01386,0.002304,14.11,23.21,89.71,611.1,0.1176,0.1843,0.1703,0.0866,0.2618,0.07609\n 3|10.16,19.59,64.73,311.7,0.1003,0.07504,0.005025,0.01116,0.1791,0.06331,0.2441,2.09,1.648,16.8,0.01291,0.02222,0.004174,0.007082,0.02572,0.002278,10.65,22.88,67.88,347.3,0.1265,0.12,0.01005,0.02232,0.2262,0.06742\n 4|15.46,23.95,103.8,731.3,0.1183,0.187,0.203,0.0852,0.1807,0.07083,0.3331,1.961,2.937,32.52,0.009538,0.0494,0.06019,0.02041,0.02105,0.006,17.11,36.33,117.7,909.4,0.1732,0.4967,0.5911,0.2163,0.3013,0.1067\n 5|9.742,15.67,61.5,289.9,0.09037,0.04689,0.01103,0.01407,0.2081,0.06312,0.2684,1.409,1.75,16.39,0.0138,0.01067,0.008347,0.009472,0.01798,0.004261,10.75,20.88,68.09,355.2,0.1467,0.0937,0.04043,0.05159,0.2841,0.08175\n 6|12.05,14.63,78.04,449.3,0.1031,0.09092,0.06592,0.02749,0.1675,0.06043,0.2636,0.7294,1.848,19.87,0.005488,0.01427,0.02322,0.00566,0.01428,0.002422,13.76,20.7,89.88,582.6,0.1494,0.2156,0.305,0.06548,0.2747,0.08301\n 7|14.58,13.66,94.29,658.8,0.09832,0.08918,0.08222,0.04349,0.1739,0.0564,0.4165,0.6237,2.561,37.11,0.004953,0.01812,0.03035,0.008648,0.01539,0.002281,16.76,17.24,108.5,862.0,0.1223,0.1928,0.2492,0.09186,0.2626,0.07048\n 8|14.87,16.67,98.64,682.5,0.1162,0.1649,0.169,0.08923,0.2157,0.06768,0.4266,0.9489,2.989,41.18,0.006985,0.02563,0.03011,0.01271,0.01602,0.003884,18.81,27.37,127.1,1095.0,0.1878,0.448,0.4704,0.2027,0.3585,0.1065\n 9|12.81,13.06,81.29,508.8,0.08739,0.03774,0.009193,0.0133,0.1466,0.06133,0.2889,0.9899,1.778,21.79,0.008534,0.006364,0.00618,0.007408,0.01065,0.003351,13.63,16.15,86.7,570.7,0.1162,0.05445,0.02758,0.0399,0.1783,0.07319\n 10|9.742,19.12,61.93,289.7,0.1075,0.08333,0.008934,0.01967,0.2538,0.07029,0.6965,1.747,4.607,43.52,0.01307,0.01885,0.006021,0.01052,0.031,0.004225,11.21,23.17,71.79,380.9,0.1398,0.1352,0.02085,0.04589,0.3196,0.08009\n 11|7.729,25.49,47.98,178.8,0.08098,0.04878,0.0,0.0,0.187,0.07285,0.3777,1.462,2.492,19.14,0.01266,0.009692,0.0,0.0,0.02882,0.006872,9.077,30.92,57.17,248.0,0.1256,0.0834,0.0,0.0,0.3058,0.09938\n 12|14.6,23.29,93.97,664.7,0.08682,0.06636,0.0839,0.05271,0.1627,0.05416,0.4157,1.627,2.914,33.01,0.008312,0.01742,0.03389,0.01576,0.0174,0.002871,15.79,31.71,102.2,758.2,0.1312,0.1581,0.2675,0.1359,0.2477,0.06836\n 13|10.05,17.53,64.41,310.8,0.1007,0.07326,0.02511,0.01775,0.189,0.06331,0.2619,2.015,1.778,16.85,0.007803,0.01449,0.0169,0.008043,0.021,0.002778,11.16,26.84,71.98,384.0,0.1402,0.1402,0.1055,0.06499,0.2894,0.07664\n 14|12.86,13.32,82.82,504.8,0.1134,0.08834,0.038,0.034,0.1543,0.06476,0.2212,1.042,1.614,16.57,0.00591,0.02016,0.01902,0.01011,0.01202,0.003107,14.04,21.08,92.8,599.5,0.1547,0.2231,0.1791,0.1155,0.2382,0.08553\n 15|11.43,15.39,73.06,399.8,0.09639,0.06889,0.03503,0.02875,0.1734,0.05865,0.1759,0.9938,1.143,12.67,0.005133,0.01521,0.01434,0.008602,0.01501,0.001588,12.32,22.02,79.93,462.0,0.119,0.1648,0.1399,0.08476,0.2676,0.06765\n 16|8.95,15.76,58.74,245.2,0.09462,0.1243,0.09263,0.02308,0.1305,0.07163,0.3132,0.9789,3.28,16.94,0.01835,0.0676,0.09263,0.02308,0.02384,0.005601,9.414,17.07,63.34,270.0,0.1179,0.1879,0.1544,0.03846,0.1652,0.07722\n 17|14.03,21.25,89.79,603.4,0.0907,0.06945,0.01462,0.01896,0.1517,0.05835,0.2589,1.503,1.667,22.07,0.007389,0.01383,0.007302,0.01004,0.01263,0.002925,15.33,30.28,98.27,715.5,0.1287,0.1513,0.06231,0.07963,0.2226,0.07617\n 1
turn 5 · assistant 9.9s api
→ read_file({"path": "/app/data/test.csv", "limit": "20.0"})
turn 6 · tool · terminal
{"output": "", "exit_code": 0, "error": null}
turn 6 · assistant 13.5s api
→ terminal({"command": "mkdir -p /app/output /app/data/submission /app/api"})
turn 7 · tool · write_file
{"bytes_written": 6551, "dirs_created": true}
turn 7 · assistant 216.3s api
→ write_file({"path": "/app/train_model.py", "content": "#!/usr/bin/env python3\n\"\"\"\nBreast Cancer Classification Training Script\nTrains multiple models with MLflow tracking and registers the best model.\n\"\"\"\n\nimport json\nimport os\nimport pandas as pd\nimport numpy as np\nfrom sklearn.model_selection import train_test_split\nfrom sklearn.linear_model import LogisticRegression\nfrom sklearn.svm impo…)
turn 8 · tool · terminal
{"output": "Loaded training data: (227, 31)\nLoaded test data: (342, 30)\nTraceback (most recent call last):\n File \"/app/train_model.py\", line 195, in <module>\n main()\n ~~~~^^\n File \"/app/train_model.py\", line 106, in main\n X_train, X_val, y_train, y_val = split_data(train_df)\n ~~~~~~~~~~^^^^^^^^^^\n File \"/app/train_model.py\", line 33, in split_data\n X_train, X_val, y_train, y_val, train_indices, val_indices = train_test_split(\n ~~~~~~~~~~~~~~~~^\n X, y, test_size=test_size, random_state=random_state, stratify=y, return_indices=True\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n )\n ^\n File \"/usr/local/lib/python3.13/site-packages/sklearn/utils/_param_validation.py\", line 196, in wrapper\n params = func_sig.bind(*args, **kwargs)\n File \"/usr/local/lib/python3.13/inspect.py\", line 3264, in bind\n return self._bind(args, kwargs)\n ~~~~~~~~~~^^^^^^^^^^^^^^\n File \"/usr/local/lib/python3.13/inspect.py\", line 3253, in _bind\n raise TypeError(\n 'got an unexpected keyword argument {arg!r}'.format(\n arg=next(iter(kwargs))))\nTypeError: got an unexpected keyword argument 'return_indices'", "exit_code": 1, "error": null}
turn 8 · assistant 9.2s api
→ terminal({"command": "cd /app && python train_model.py", "timeout": "180.0"})
turn 9 · tool · patch
{"success": true, "diff": "--- a//app/train_model.py\n+++ b//app/train_model.py\n@@ -30,9 +30,16 @@\n X = train_df.drop(columns=[\"target\"])\n y = train_df[\"target\"]\n \n- X_train, X_val, y_train, y_val, train_indices, val_indices = train_test_split(\n- X, y, test_size=test_size, random_state=random_state, stratify=y, return_indices=True\n- )\n+ # Get original indices before splitting\n+ original_indices = train_df.index.tolist()\n+ \n+ X_train, X_val, y_train, y_val = train_test_split(\n+ X, y, test_size=test_size, random_state=random_state, stratify=y\n+ )\n+ \n+ # Get the indices used for training and validation\n+ train_indices = X_train.index.tolist()\n+ val_indices = X_val.index.tolist()\n \n # Save split information\n split_info = {\n@@ -40,8 +47,8 @@\n \"test_size\": test_size,\n \"train_size\": len(X_train),\n \"val_size\": len(X_val),\n- \"train_indices\": train_indices.tolist(),\n- \"val_indices\": val_indices.tolist()\n+ \"train_indices\": train_indices,\n+ \"val_indices\": val_indices\n }\n \n with open(\"/app/output/split_info.json\", \"w\") as f:\n", "files_modified": ["/app/train_model.py"], "lint": {"status": "ok", "output": ""}}
turn 9 · assistant 38.5s api
→ patch({"path": "/app/train_model.py", "old_string": "def split_data(train_df, test_size=0.2, random_state=42):\n \"\"\"Split training data into train/validation sets.\"\"\"\n X = train_df.drop(columns=[\"target\"])\n y = train_df[\"target\"]\n \n X_train, X_val, y_train, y_val, train_indices, val_indices = train_test_split(\n X, y, test_size=test_size, random_state=random_state, st…)
turn 10 · tool · terminal
{"output": "2026/04/22 18:13:25 INFO mlflow.tracking.fluent: Experiment with name 'breast-cancer-classification' does not exist. Creating a new experiment.\n2026/04/22 18:13:25 WARNING mlflow.utils.git_utils: Failed to import Git (the Git executable is probably not on your PATH), so Git SHA is not available. Error: Failed to initialize: Bad git executable.\nThe git executable must be specified in one of the following ways:\n - be included in your $PATH\n - be set via $GIT_PYTHON_GIT_EXECUTABLE\n - explicitly set via git.refresh(<full-path-to-git-executable>)\n\nAll git commands will error until this is rectified.\n\nThis initial message can be silenced or aggravated in the future by setting the\n$GIT_PYTHON_REFRESH environment variable. Use one of the following values:\n - quiet|q|silence|s|silent|none|n|0: for no message or exception\n - warn|w|warning|log|l|1: for a warning message (logging level CRITICAL, displayed by default)\n - error|e|exception|raise|r|2: for a raised exception\n\nExample:\n export GIT_PYTHON_REFRESH=quiet\n\n/usr/local/lib/python3.13/site-packages/sklearn/linear_model/_logistic.py:473: ConvergenceWarning: lbfgs failed to converge after 1000 iteration(s) (status=1):\nSTOP: TOTAL NO. OF ITERATIONS REACHED LIMIT\n\nIncrease the number of iterations to improve the convergence (max_iter=1000).\nYou might also want to scale the data as shown in:\n https://scikit-learn.org/stable/modules/preprocessing.html\nPlease also refer to the documentation for alternative solver options:\n https://scikit-learn.org/stable/modules/linear_model.html#logistic-regression\n n_iter_i = _check_optimize_result(\n2026/04/22 18:13:29 WARNING mlflow.utils.environment: Encountered an unexpected error while inferring pip requirements (model URI: /tmp/tmpatyndljb/model/model.pkl, flavor: sklearn). Fall back to return ['scikit-learn==1.7.2', 'cloudpickle==3.1.2']. Set logging level to DEBUG to see the full traceback. \n2026/04/22 18:13:29 WARNING mlflow.models.model: Model logged without a signature and input example. Please set `input_example` parameter when logging the model to auto infer the model signature.\n2026/04/22 18:13:31 WARNING mlflow.utils.environment: Encountered an unexpected error while inferring pip requirements (model URI: /tmp/tmp2s7i7ttx/model/model.pkl, flavor: sklearn). Fall back to return ['scikit-learn==1.7.2', 'cloudpickle==3.1.2']. Set logging level to DEBUG to see the full traceback. \n2026/04/22 18:13:31 WARNING mlflow.models.model: Model logged without a signature and input example. Please set `input_example` parameter when logging the model to auto infer the model signature.\n2026/04/22 18:13:32 WARNING mlflow.utils.environment: Encountered an unexpected error while inferring pip requirements (model URI: /tmp/tmp2s8_y5xy/model/model.pkl, flavor: sklearn). Fall back to return ['scikit-learn==1.7.2', 'cloudpickle==3.1.2']. Set logging level to DEBUG to see the full traceback. \n2026/04/22 18:13:32 WARNING mlflow.models.model: Model logged without a signature and input example. Please set `input_example` parameter when logging the model to auto infer the model signature.\nSuccessfully registered model 'breast-cancer-classifier'.\n2026/04/22 18:13:32 INFO mlflow.store.model_registry.abstract_store: Waiting up to 300 seconds for model version to finish creation. Model name: breast-cancer-classifier, version 1\nCreated version '1' of model 'breast-cancer-classifier'.\n/app/train_model.py:165: FutureWarning: ``mlflow.tracking.client.MlflowClient.transition_model_version_stage`` is deprecated since 2.9.0. Model registry stages will be removed in a future major release. To learn more about the deprecation of model registry stages, see our migration guide here: https://mlflow.org/docs/latest/model-registry.html#migrating-from-stages\n client.transition_model_version_stage(\nLoaded training data: (227, 31)\nLoaded test data: (342, 30)\nTrain size: 181, Val size: 46\n\nTraining Logistic Re
turn 10 · assistant 9.9s api
→ terminal({"command": "cd /app && python train_model.py", "timeout": "180.0"})
turn 11 · tool · terminal
{"output": "{\n \"random_state\": 42,\n \"test_size\": 0.2,\n \"train_size\": 181,\n \"val_size\": 46,\n \"train_indices\": [\n 60,\n 172,\n 141,\n 90,\n 180,\n 80,\n 150,\n 133,\n 169,\n 154,\n 98,\n 81,\n 136,\n 166,\n 35,\n 184,\n 29,\n 41,\n 48,\n 45,\n 140,\n 177,\n 76,\n 196,\n 126,\n 144,\n 75,\n 44,\n 74,\n 130,\n 92,\n 115,\n 215,\n 21,\n 43,\n 167,\n 181,\n 139,\n 121,\n 120,\n 189,\n 137,\n 102,\n 207,\n 124,\n 62,\n 182,\n 34,\n 104,\n 200,\n 63,\n 105,\n 78,\n 165,\n 221,\n 148,\n 99,\n 176,\n 53,\n 173,\n 153,\n 185,\n 23,\n 86,\n 70,\n 127,\n 201,\n 143,\n 108,\n 26,\n 51,\n 163,\n 211,\n 170,\n 112,\n 195,\n 32,\n 206,\n 52,\n 174,\n 224,\n 114,\n 204,\n 125,\n 69,\n 91,\n 4,\n 220,\n 107,\n 191,\n 17,\n 188,\n 24,\n 155,\n 25,\n 73,\n 113,\n 156,\n 123,\n 10,\n 95,\n 217,\n 116,\n 138,\n 216,\n 57,\n 30,\n 213,\n 19,\n 72,\n 175,\n 203,\n 135,\n 22,\n 66,\n 103,\n 122,\n 97,\n 190,\n 85,\n 146,\n 158,\n 82,\n 218,\n 101,\n 100,\n 36,\n 65,\n 6,\n 39,\n 40,\n 61,\n 210,\n 56,\n 164,\n 33,\n 219,\n 27,\n 0,\n 223,\n 187,\n 64,\n 55,\n 202,\n 8,\n 226,\n 118,\n 12,\n 212,\n 161,\n 15,\n 18,\n 142,\n 222,\n 179,\n 128,\n 1,\n 178,\n 89,\n 109,\n 50,\n 83,\n 38,\n 84,\n 42,\n 159,\n 152,\n 111,\n 77,\n 2,\n 28,\n 183,\n 96,\n 3,\n 129,\n 157,\n 160,\n 49,\n 214,\n 194,\n 14\n ],\n \"val_indices\": [\n 145,\n 59,\n 79,\n 117,\n 151,\n 171,\n 37,\n 208,\n 106,\n 9,\n 5,\n 87,\n 88,\n 11,\n 67,\n 199,\n 197,\n 132,\n 192,\n 93,\n 134,\n 147,\n 198,\n 209,\n 68,\n 71,\n 119,\n 58,\n 47,\n 54,\n 162,\n 186,\n 46,\n 149,\n 193,\n 16,\n 13,\n 110,\n 205,\n 7,\n 225,\n 20,\n 131,\n 31,\n 168,\n 94\n ]\n}", "exit_code": 0, "error": null}
turn 11 · assistant 9.6s api
→ terminal({"command": "cat /app/output/split_info.json"})
turn 12 · tool · terminal
{"output": "{\n \"experiment_name\": \"breast-cancer-classification\",\n \"runs\": [\n {\n \"run_id\": \"a9d5eb49afcf473ebdbf8b30efb8a3f5\",\n \"model_type\": \"logistic_regression\",\n \"hyperparameters\": {\n \"C\": 1.0,\n \"class_weight\": null,\n \"dual\": false,\n \"fit_intercept\": true,\n \"intercept_scaling\": 1,\n \"l1_ratio\": null,\n \"max_iter\": 1000,\n \"multi_class\": \"deprecated\",\n \"n_jobs\": null,\n \"penalty\": \"l2\",\n \"random_state\": 42,\n \"solver\": \"lbfgs\",\n \"tol\": 0.0001,\n \"verbose\": 0,\n \"warm_start\": false\n },\n \"train_accuracy\": 0.9613259668508287,\n \"val_accuracy\": 0.9347826086956522,\n \"precision\": 0.90625,\n \"recall\": 1.0,\n \"f1_score\": 0.9508196721311475\n },\n {\n \"run_id\": \"411d20eba8774bc387b5e24b86bf54c6\",\n \"model_type\": \"svm\",\n \"hyperparameters\": {\n \"C\": 1.0,\n \"break_ties\": false,\n \"cache_size\": 200,\n \"class_weight\": null,\n \"coef0\": 0.0,\n \"decision_function_shape\": \"ovr\",\n \"degree\": 3,\n \"gamma\": \"scale\",\n \"kernel\": \"rbf\",\n \"max_iter\": -1,\n \"probability\": false,\n \"random_state\": 42,\n \"shrinking\": true,\n \"tol\": 0.001,\n \"verbose\": false\n },\n \"train_accuracy\": 0.9226519337016574,\n \"val_accuracy\": 0.9130434782608695,\n \"precision\": 0.8787878787878788,\n \"recall\": 1.0,\n \"f1_score\": 0.9354838709677419\n },\n {\n \"run_id\": \"db6b4da164d34d318186cb33cc041e22\",\n \"model_type\": \"random_forest\",\n \"hyperparameters\": {\n \"bootstrap\": true,\n \"ccp_alpha\": 0.0,\n \"class_weight\": null,\n \"criterion\": \"gini\",\n \"max_depth\": 10,\n \"max_features\": \"sqrt\",\n \"max_leaf_nodes\": null,\n \"max_samples\": null,\n \"min_impurity_decrease\": 0.0,\n \"min_samples_leaf\": 2,\n \"min_samples_split\": 5,\n \"min_weight_fraction_leaf\": 0.0,\n \"monotonic_cst\": null,\n \"n_estimators\": 100,\n \"n_jobs\": null,\n \"oob_score\": false,\n \"random_state\": 42,\n \"verbose\": 0,\n \"warm_start\": false\n },\n \"train_accuracy\": 0.994475138121547,\n \"val_accuracy\": 0.9130434782608695,\n \"precision\": 0.9032258064516129,\n \"recall\": 0.9655172413793104,\n \"f1_score\": 0.9333333333333333\n }\n ],\n \"best_run_id\": \"a9d5eb49afcf473ebdbf8b30efb8a3f5\",\n \"best_model_type\": \"logistic_regression\"\n}", "exit_code": 0, "error": null}
turn 12 · assistant 10.6s api
→ terminal({"command": "cat /app/output/experiments.json"})
turn 13 · tool · terminal
{"output": "{\n \"model_name\": \"breast-cancer-classifier\",\n \"model_version\": 1,\n \"model_stage\": \"Production\",\n \"run_id\": \"a9d5eb49afcf473ebdbf8b30efb8a3f5\",\n \"model_type\": \"logistic_regression\",\n \"hyperparameters\": {\n \"C\": 1.0,\n \"class_weight\": null,\n \"dual\": false,\n \"fit_intercept\": true,\n \"intercept_scaling\": 1,\n \"l1_ratio\": null,\n \"max_iter\": 1000,\n \"multi_class\": \"deprecated\",\n \"n_jobs\": null,\n \"penalty\": \"l2\",\n \"random_state\": 42,\n \"solver\": \"lbfgs\",\n \"tol\": 0.0001,\n \"verbose\": 0,\n \"warm_start\": false\n },\n \"val_accuracy\": 0.9347826086956522,\n \"precision\": 0.90625,\n \"recall\": 1.0,\n \"f1_score\": 0.9508196721311475\n}", "exit_code": 0, "error": null}
turn 13 · assistant 10.8s api
→ terminal({"command": "cat /app/output/best_model_info.json"})
turn 14 · tool · write_file
{"bytes_written": 4809, "dirs_created": true}
turn 14 · assistant 186.4s api
→ write_file({"path": "/app/api/app.py", "content": "#!/usr/bin/env python3\n\"\"\"\nFastAPI application for breast cancer classification.\nServes predictions using a model registered in MLflow Model Registry.\n\"\"\"\n\nimport os\nimport json\nfrom fastapi import FastAPI, HTTPException\nfrom pydantic import BaseModel\nimport mlflow\nimport mlflow.sklearn\n\n# Set MLflow tracking URI\nmlflow.set_tracking_uri(\…)
turn 15 · tool · terminal
{"output": "Background process started", "session_id": "proc_d46ef9bbb608", "pid": null, "exit_code": 0, "error": null}
turn 15 · assistant 28.9s api
→ terminal({"command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 &", "timeout": "10.0", "background": true})
turn 16 · tool · process
{"status": "exited", "exit_code": -1, "output": ""}
turn 16 · assistant 12.9s api
→ process({"action": "wait", "session_id": "proc_d46ef9bbb608", "timeout": "5.0"})
turn 17 · tool · process
{"processes": [{"session_id": "proc_d46ef9bbb608", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:17:41", "uptime_seconds": 30, "status": "exited", "output_preview": "", "exit_code": -1}]}
turn 17 · assistant 17.0s api
→ process({"action": "list"})
turn 18 · tool · process
{"session_id": "proc_d46ef9bbb608", "status": "exited", "output": "", "total_lines": 0, "showing": "0 lines"}
turn 18 · assistant 12.3s api
→ process({"action": "log", "session_id": "proc_d46ef9bbb608"})
turn 19 · tool · terminal
{"output": "Background process started", "session_id": "proc_69773652f10f", "pid": null, "exit_code": 0, "error": null}
turn 19 · assistant 39.9s api
→ terminal({"command": "cd /app && nohup uvicorn api.app:app --host 0.0.0.0 --port 8000 > /app/api/server.log 2>&1 &", "timeout": "5.0", "background": true})
turn 20 · tool · process
{"status": "exited", "exit_code": -1, "output": ""}
turn 20 · assistant 28.7s api
→ process({"action": "wait", "session_id": "proc_69773652f10f", "timeout": "5.0"})
turn 21 · tool · terminal
{"output": "No log file", "exit_code": 0, "error": null}
turn 21 · assistant 22.6s api
→ terminal({"command": "cat /app/api/server.log 2>/dev/null || echo \"No log file\""})
turn 22 · tool · terminal
{"output": "", "exit_code": -1, "error": "Foreground command uses '&' backgrounding. Use terminal(background=true) for long-lived processes, then run health checks and tests in follow-up terminal calls.", "status": "error"}
turn 22 · assistant 25.4s api
→ terminal({"command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 &\nsleep 3\ncurl -s http://localhost:8000/health", "timeout": "10.0"})
turn 23 · tool · terminal
{"output": "Background process started", "session_id": "proc_ad4eed019e47", "pid": null, "exit_code": 0, "error": null, "notify_on_complete": true}
turn 23 · assistant 23.6s api
→ terminal({"command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000", "timeout": "10.0", "background": true, "notify_on_complete": true})
turn 24 · tool · process
{"status": "exited", "exit_code": -1, "output": ""}
turn 24 · assistant 21.0s api
→ process({"action": "wait", "session_id": "proc_ad4eed019e47", "timeout": "10.0"})
turn 25 · tool · terminal
{"output": "", "exit_code": -1, "error": "This foreground command appears to start a long-lived server/watch process. Run it with background=true, verify readiness (health endpoint/log signal), then execute tests in a separate command.", "status": "error"}
turn 25 · assistant 13.8s api
→ terminal({"command": "ps aux | grep uvicorn || echo \"No uvicorn process\""})
turn 26 · tool · terminal
{"output": "Background process started", "session_id": "proc_3af93042b950", "pid": null, "exit_code": 0, "error": null}
turn 26 · assistant 32.3s api
→ terminal({"command": "cd /app && python -m uvicorn api.app:app --host 0.0.0.0 --port 8000", "timeout": "5.0", "background": true})
turn 27 · tool · process
{"session_id": "proc_3af93042b950", "command": "cd /app && python -m uvicorn api.app:app --host 0.0.0.0 --port 8000", "status": "exited", "pid": null, "uptime_seconds": 20, "output_preview": "", "exit_code": -1}
turn 27 · assistant 20.6s api
→ process({"action": "poll", "session_id": "proc_3af93042b950"})
turn 28 · tool · terminal
{"output": "Import successful", "exit_code": 0, "error": null}
turn 28 · assistant 18.0s api
→ terminal({"command": "cd /app && python -c \"from api.app import app; print('Import successful')\""})
turn 29 · tool · terminal
{"output": "", "exit_code": -1, "error": "Foreground command uses '&' backgrounding. Use terminal(background=true) for long-lived processes, then run health checks and tests in follow-up terminal calls.", "status": "error"}
turn 29 · assistant 21.2s api
→ terminal({"command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 --app-dir . &\nsleep 5\ncurl -s http://localhost:8000/health", "timeout": "15.0"})
turn 30 · tool · process
{"processes": [{"session_id": "proc_d46ef9bbb608", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:17:41", "uptime_seconds": 324, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_69773652f10f", "command": "cd /app && nohup uvicorn api.app:app --host 0.0.0.0 --port 8000 > /app/api/server.log 2>&1 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:19:03", "uptime_seconds": 242, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_ad4eed019e47", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:20:44", "uptime_seconds": 141, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_3af93042b950", "command": "cd /app && python -m uvicorn api.app:app --host 0.0.0.0 --port 8000", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:21:51", "uptime_seconds": 74, "status": "exited", "output_preview": "", "exit_code": -1}]}
turn 30 · assistant 11.8s api
→ process({"action": "list"})
turn 31 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 31 · assistant 18.3s api
→ process({"action": "kill", "session_id": "proc_d46ef9bbb608"})
turn 32 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 32 · assistant 17.5s api
→ process({"action": "kill", "session_id": "proc_69773652f10f"})
turn 33 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 33 · assistant 19.0s api
→ process({"action": "kill", "session_id": "proc_ad4eed019e47"})
turn 34 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 34 · assistant 13.4s api
→ process({"action": "kill", "session_id": "proc_3af93042b950"})
turn 35 · tool · terminal
{"output": "Background process started", "session_id": "proc_bca4f7f5c5ce", "pid": null, "exit_code": 0, "error": null}
turn 35 · assistant 20.6s api
→ terminal({"command": "cd /app && nohup uvicorn api.app:app --host 0.0.0.0 --port 8000 > /app/api/server.log 2>&1 &", "background": true})
turn 36 · tool · process
{"status": "exited", "exit_code": -1, "output": ""}
turn 36 · assistant 20.0s api
→ process({"action": "wait", "session_id": "proc_bca4f7f5c5ce", "timeout": "5.0"})
turn 37 · tool · process
{"session_id": "proc_bca4f7f5c5ce", "status": "exited", "output": "", "total_lines": 0, "showing": "0 lines"}
turn 37 · assistant 17.3s api
→ process({"action": "log", "session_id": "proc_bca4f7f5c5ce"})
turn 38 · tool · terminal
{"output": "---\ntotal 24\ndrwxr-xr-x 1 root root 4096 Apr 22 18:22 .\ndrwxr-xr-x 1 root root 4096 Apr 22 18:13 ..\ndrwxr-xr-x 2 root root 4096 Apr 22 18:22 __pycache__\n-rw-r--r-- 1 root root 4809 Apr 22 18:17 app.py", "exit_code": 0, "error": null}
turn 38 · assistant 15.0s api
→ terminal({"command": "cat /app/api/server.log 2>/dev/null; echo \"---\"; ls -la /app/api/"})
turn 39 · tool · terminal
{"output": "Background process started", "session_id": "proc_8680b4e6cfa5", "pid": null, "exit_code": 0, "error": null}
turn 39 · assistant 27.7s api
→ terminal({"command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 --timeout-keep-alive 120", "background": true, "timeout": "5.0"})
turn 40 · tool · process
{"session_id": "proc_8680b4e6cfa5", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 --timeout-keep-alive 120", "status": "exited", "pid": null, "uptime_seconds": 19, "output_preview": "", "exit_code": -1}
turn 40 · assistant 19.1s api
→ process({"action": "poll", "session_id": "proc_8680b4e6cfa5"})
turn 41 · tool · process
{"session_id": "proc_8680b4e6cfa5", "status": "exited", "output": "", "total_lines": 0, "showing": "0 lines"}
turn 41 · assistant 21.4s api
→ process({"action": "log", "session_id": "proc_8680b4e6cfa5"})
turn 42 · tool · process
{"processes": [{"session_id": "proc_d46ef9bbb608", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:17:41", "uptime_seconds": 551, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_69773652f10f", "command": "cd /app && nohup uvicorn api.app:app --host 0.0.0.0 --port 8000 > /app/api/server.log 2>&1 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:19:03", "uptime_seconds": 469, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_ad4eed019e47", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:20:44", "uptime_seconds": 368, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_3af93042b950", "command": "cd /app && python -m uvicorn api.app:app --host 0.0.0.0 --port 8000", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:21:51", "uptime_seconds": 301, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_bca4f7f5c5ce", "command": "cd /app && nohup uvicorn api.app:app --host 0.0.0.0 --port 8000 > /app/api/server.log 2>&1 &", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:24:34", "uptime_seconds": 138, "status": "exited", "output_preview": "", "exit_code": -1}, {"session_id": "proc_8680b4e6cfa5", "command": "cd /app && uvicorn api.app:app --host 0.0.0.0 --port 8000 --timeout-keep-alive 120", "cwd": "/app", "pid": null, "started_at": "2026-04-22T13:25:55", "uptime_seconds": 57, "status": "exited", "output_preview": "", "exit_code": -1}]}
turn 42 · assistant 17.1s api
→ process({"action": "list"})
turn 43 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 43 · assistant 23.7s api
The processes are exiting immediately. Let me check if there's an issue with the app or if it's a different problem.
→ process({"action": "kill", "session_id": "proc_d46ef9bbb608"})
turn 44 · tool · process
{"status": "already_exited", "exit_code": -1}
turn 44 · assistant 20.4s api
→ process({"action": "kill", "session_id": "proc_69773652f10f"})