hermes · spark · shootout

← hermes-4-70b-fp8

amuse-install

scientific-computing fail 18 turns 0s 17 tool calls
grader output from /tests/test.sh in the task sandbox 
grader verdict: FAIL (exit 0)
1f2bdd7c84c45f38c825f9549d2bc941de9fdc85
Expected file hash: eb181d4c3ea88b13e6486c731f2bdd7c84c45f38c825f9549d2bc941de9fdc85
=========================== short test summary info ============================
PASSED ../../tests/test_outputs.py::test_virtual_environment_created
PASSED ../../tests/test_outputs.py::test_test_script_unchanged
FAILED ../../tests/test_outputs.py::test_test_script_executes - AssertionErro...
========================= 1 failed, 2 passed in 0.05s ==========================
system · msg 0 
You are an expert terminal agent. You MUST use the provided tools to complete tasks. Use the terminal tool to run shell commands, read_file to read files, write_file to write files, search_files to search, and patch to edit files. Do NOT write out solutions as text - execute them using the tools. Always start by exploring the environment with terminal commands.
user · msg 1 
You are given a repository called amuse in /app. This repository contains the AMUSE framework's codebase.

You need to:
- Create a Python virtual environment in the AMUSE repository directory at /app/amuse/.venv
- Understand and run the test_script.py example from /app/test_script.py
  
Requirements:
- Create a virtual environment at `/app/amuse/.venv` for the AMUSE installation and install it such that the test_script.py example runs successfully.
- Do not modify /app/test_script.py
assistant · msg 2 1 tool call 
terminal({"command": "cd /app/amuse && python3 -m venv .venv"})
tool · msg 3 
{"output": "", "exit_code": 0, "error": null}
assistant · msg 4 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install -e ."})
tool · msg 5 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nObtaining file:///app/amuse\n\n[notice] A new release of pip is available: 25.3 -> 26.0.1\n[notice] To update, run: pip install --upgrade pip\nERROR: file:///app/amuse does not appear to be a Python project: neither 'setup.py' nor 'pyproject.toml' found.", "exit_code": 1, "error": null}
assistant · msg 6 1 tool call 
terminal({"command": "cd /app/amuse && ls -la"})
tool · msg 7 
{"output": "total 168\ndrwxr-xr-x 1 root root  4096 Apr 22 00:31 .\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 ..\n-rw-r--r-- 1 root root   417 Mar  4 09:06 .editorconfig\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 .git\n-rw-r--r-- 1 root root    21 Mar  4 09:06 .gitattributes\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 .github\n-rw-r--r-- 1 root root 12407 Mar  4 09:06 .gitignore\n-rw-r--r-- 1 root root   604 Mar  4 09:06 .readthedocs.yml\ndrwxr-xr-x 5 root root  4096 Apr 22 00:31 .venv\n-rw-r--r-- 1 root root  3094 Mar  4 09:06 .zenodo.json\n-rw-r--r-- 1 root root  3615 Mar  4 09:06 CITATION.cff\n-rw-r--r-- 1 root root  2798 Mar  4 09:06 CONTRIBUTING.md\n-rw-r--r-- 1 root root 11357 Mar  4 09:06 LICENSE\n-rw-r--r-- 1 root root   956 Mar  4 09:06 NOTICE\n-rw-r--r-- 1 root root  1238 Mar  4 09:06 README.md\n-rw-r--r-- 1 root root   246 Mar  4 09:06 VERSION\n-rw-r--r-- 1 root root  5274 Mar  4 09:06 amuserc.example\ndrwxr-xr-x 2 root root  4096 Mar  4 09:06 bin\n-rw-r--r-- 1 root root    15 Mar  4 09:06 codecov.yml\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 doc\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 examples\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 lib\n-rw-r--r-- 1 root root    56 Mar  4 09:06 recommended.txt\n-rwxr-xr-x 1 root root  8359 Mar  4 09:06 setup\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 src\ndrwxr-xr-x 1 root root  4096 Mar  4 09:06 support\nlrwxrwxrwx 1 root root    24 Mar  4 09:06 tutorial -> doc/interactive_tutorial", "exit_code": 0, "error": null}
assistant · msg 8 1 tool call 
terminal({"command": "cd /app/amuse && cat setup"})
tool · msg 9 
{"output": "#!/bin/sh\n\n# This script is written in POSIX-compliant shell, and should run with any shell\n# supporting this, including dash (/bin/sh on Ubuntu), bash (/bin/sh on many other\n# systems) and bash 3.2 (/bin/sh on macOS). Zsh should also work in POSIX mode, so if\n# macOS ever changes its /bin/sh then we should still be good.\n\n# This is written in an old-fashioned style with procedures and global variables,\n# because that's all we can do in a shell. Please don't write shell scripts this long if\n# you can avoid it, and please don't use global variables like this in any other\n# language.\n\n\n# When installing the framework into a conda environment, we install these conda\n# versions of its dependencies to minimise the number of pip-installed packages.\n# These must be single-quoted as shown, or the code below will get confused.\n#\nFRAMEWORK_CONDA_DEPS=\"'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0'\"\n\n\n# Disabled tests\n#\n# Some of the tests are currently broken, and we need to figure out what to do with them\n# and/or who needs to fix them how. Meanwhile, we want to have a set of passing tests\n# for our new CI, because we don't want to normalise failure. So we disable the broken\n# tests for now, but print a note whenever the tests are run. See issue #1103.\n#\nBAD_EXT_TESTS=\"test_jobserver TestLimepy TestRotatingBridge::test1\"\nBAD_EXT_TESTS=\"${BAD_EXT_TESTS} TestHeatingWind::test_supernova\"\nBAD_EXT_TESTS=\"${BAD_EXT_TESTS} TestHeatingWind::test_supernova_manual\"\nBAD_EXT_TESTS=\"${BAD_EXT_TESTS} TestsForIssue123\"\n\n\n# Extra pytest options for debugging\nPYTEST_OPTS=''\n# PYTEST_OPTS='-s -vvv --log-cli-level=debug'\n\n\n. support/setup/util.sh\n. support/setup/log.sh\n. support/setup/format.sh\n. support/setup/help.sh\n. support/setup/environment.sh\n. support/setup/installing.sh\n. support/setup/testing.sh\n\n\n# Show the current configuration\n#\n# This uses the following variables:\n#\n# FEATURES - from support/configuration.sh\n#\nconfigure() {\n    en_pack_text=\"$(printf '%b' \"${ENABLED_PACKAGES_TEXT}\" | pr -3 -t -w 90)\"\n\n    printf '\\n'\n    printf '%b\\n' \"${COLOR_CYAN}*** Configuration complete ***${COLOR_END}\"\n    printf 'Detected features:%s\\n' \"${FEATURES}\"\n    printf '\\n'\n    printf '%b\\n' \"${COLOR_GREEN}** Enabled packages **${COLOR_END}\"\n    printf '\\n%b\\n' \"Packages marked i) are currently installed.\"\n    printf '\\n%b' \"${en_pack_text}\"\n    printf '\\n\\n'\n    printf '%b\\n' \"${COLOR_RED}** Disabled packages **${COLOR_END}\"\n    printf '\\n%b' \"${DISABLED_PACKAGES_TEXT}\"\n    printf '%b' \"${BROKEN_PACKAGES_TEXT}\"\n    printf '\\n'\n    printf '%s\\n' \"For broken packages, you can find the listed issue at https://github.com/amusecode/amuse/issues\"\n    printf '\\n'\n\n    printf '%b\\n\\n' \"${COLOR_CYAN}*** Next steps ***${COLOR_END}\"\n\n    check_shell_environment\n\n    can_install=\"yes\"\n    if [ \"a${ENV_TYPE}\" = \"a\" ] ; then\n        print_environment_step\n        can_install=\"no\"\n    elif [ \"a${HAVE_PIP}\" = \"a\" ] || [ \"a${HAVE_WHEEL}\" = \"a\" ] ; then\n        print_pip_wheel_step\n        can_install=\"no\"\n    elif [ \"a${DISABLED_PACKAGES}\" != \"a\" ] ; then\n        print_enable_packages_step\n    fi\n\n    if [ \"a${ENABLED_PACKAGES}\" = \"a\" ] ; then\n        can_install=\"no\"\n    fi\n\n    if [ \"${can_install}\" = \"yes\" ] ; then\n        print_install_amuse_step\n    fi\n}\n\n\n# Install command\n#\n# This checks what we're supposed to install and dispatches accordingly.\n#\ninstall() {\n    targets=\"$*\"\n\n    for target in ${targets} ; do\n        check_install \"${target}\"\n\n        case ${target} in\n            all )\n                install_all\n                ;;\n            amuse-framework | framework )\n                target=\"$(normalise_package_name ${target})\"\n                install_framework\n                ;;\n            sapporo_light )\n                install_sapp
… (4877 more chars)
assistant · msg 10 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && ./setup configure"})
tool · msg 11 
{"output": "Checking for dependencies, one moment please...\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\n\n*** Configuration complete ***\nDetected features: python python-dev install patch tar gunzip perl bison\n\n** Enabled packages **\n\nPackages marked i) are currently installed.\n\n\n\n** Disabled packages **\n\namuse-framework (missing features: c c++ fortran mpi)\nsapporo_light (missing features: c c++ cuda)\namuse-aarsethzare (missing features: amuse-framework gmake mpi fortran mpi)\namuse-adaptb (missing features: amuse-framework gmake mpi c++ mpi gmp mpfr)\namuse-athena (missing features: amuse-framework gmake mpi c c++ download mpi fftw)\namuse-bhtree (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-brutus (missing features: amuse-framework gmake mpi c c++ mpi gmp mpfr)\namuse-bse (missing features: amuse-framework gmake mpi fortran mpi)\namuse-capreole (missing features: amuse-framework gmake mpi fortran mpi)\namuse-etics-cuda (missing features: amuse-framework gmake mpi c++ mpi cuda hdf5)\namuse-evtwin (missing features: amuse-framework gmake mpi fortran cmake mpi)\namuse-fastkick-cuda (missing features: amuse-framework gmake mpi c++ mpi cuda)\namuse-fastkick (missing features: amuse-framework gmake mpi c++ mpi)\namuse-fi (missing features: amuse-framework gmake mpi c fortran openmp fftw)\namuse-fractalcluster (missing features: amuse-framework gmake mpi fortran mpi)\namuse-gadget2 (missing features: amuse-framework gmake mpi c mpi gsl)\namuse-galactics (missing features: amuse-framework gmake mpi c fortran mpi)\namuse-galaxia (missing features: amuse-framework gmake mpi fortran mpi blas lapack)\namuse-halogen (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-hermite (missing features: amuse-framework gmake mpi c++ mpi)\namuse-hermite-grx (missing features: amuse-framework gmake mpi c++ download mpi)\namuse-higpus-cuda (missing features: amuse-framework gmake mpi c++ mpi openmp cuda)\namuse-hop (missing features: amuse-framework gmake mpi c mpi)\namuse-huayno-opencl (missing features: amuse-framework gmake mpi c c++ mpi opencl)\namuse-huayno-openmp (missing features: amuse-framework gmake mpi c c++ mpi openmp)\namuse-huayno (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-kepler (missing features: amuse-framework gmake mpi c++ mpi)\namuse-kepler-orbiters (missing features: amuse-framework gmake mpi c++ mpi)\namuse-krome (missing features: amuse-framework gmake mpi fortran download mpi)\namuse-mameclot (missing features: amuse-framework gmake mpi c mpi)\namuse-mercury (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mesa-r15140 (missing features: amuse-framework gmake mpi c c++ fortran cmake download mpi openmp hdf5)\namuse-mesa-r2208 (missing features: amuse-framework gmake mpi fortran download mpi openmp)\namuse-mi6 (missing features: amuse-framework gmake mpi c++ mpi)\namuse-mikkola (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mmams (missing features: amuse-framework gmake mpi c c++ cmake mpi gsl)\namuse-mobse (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mocassin (missing features: amuse-framework gmake mpi fortran download mpi)\namuse-mosse (missing features: amuse-framework gmake mpi fortran mpi)
… (2357 more chars)
assistant · msg 12 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && python3 -m pip install pip wheel"})
tool · msg 13 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nRequirement already satisfied: pip in ./.venv/lib/python3.13/site-packages (25.3)\nCollecting wheel\n  Downloading wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)\nCollecting packaging>=24.0 (from wheel)\n  Downloading packaging-26.1-py3-none-any.whl.metadata (3.5 kB)\nDownloading wheel-0.46.3-py3-none-any.whl (30 kB)\nDownloading packaging-26.1-py3-none-any.whl (95 kB)\nInstalling collected packages: packaging, wheel\n\nSuccessfully installed packaging-26.1 wheel-0.46.3\n\n[notice] A new release of pip is available: 25.3 -> 26.0.1\n[notice] To update, run: pip install --upgrade pip", "exit_code": 0, "error": null}
assistant · msg 14 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && ./setup configure"})
tool · msg 15 
{"output": "Checking for dependencies, one moment please...\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\n\n*** Configuration complete ***\nDetected features: python python-dev install patch tar gunzip perl bison\n\n** Enabled packages **\n\nPackages marked i) are currently installed.\n\n\n\n** Disabled packages **\n\namuse-framework (missing features: c c++ fortran mpi)\nsapporo_light (missing features: c c++ cuda)\namuse-aarsethzare (missing features: amuse-framework gmake mpi fortran mpi)\namuse-adaptb (missing features: amuse-framework gmake mpi c++ mpi gmp mpfr)\namuse-athena (missing features: amuse-framework gmake mpi c c++ download mpi fftw)\namuse-bhtree (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-brutus (missing features: amuse-framework gmake mpi c c++ mpi gmp mpfr)\namuse-bse (missing features: amuse-framework gmake mpi fortran mpi)\namuse-capreole (missing features: amuse-framework gmake mpi fortran mpi)\namuse-etics-cuda (missing features: amuse-framework gmake mpi c++ mpi cuda hdf5)\namuse-evtwin (missing features: amuse-framework gmake mpi fortran cmake mpi)\namuse-fastkick-cuda (missing features: amuse-framework gmake mpi c++ mpi cuda)\namuse-fastkick (missing features: amuse-framework gmake mpi c++ mpi)\namuse-fi (missing features: amuse-framework gmake mpi c fortran openmp fftw)\namuse-fractalcluster (missing features: amuse-framework gmake mpi fortran mpi)\namuse-gadget2 (missing features: amuse-framework gmake mpi c mpi gsl)\namuse-galactics (missing features: amuse-framework gmake mpi c fortran mpi)\namuse-galaxia (missing features: amuse-framework gmake mpi fortran mpi blas lapack)\namuse-halogen (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-hermite (missing features: amuse-framework gmake mpi c++ mpi)\namuse-hermite-grx (missing features: amuse-framework gmake mpi c++ download mpi)\namuse-higpus-cuda (missing features: amuse-framework gmake mpi c++ mpi openmp cuda)\namuse-hop (missing features: amuse-framework gmake mpi c mpi)\namuse-huayno-opencl (missing features: amuse-framework gmake mpi c c++ mpi opencl)\namuse-huayno-openmp (missing features: amuse-framework gmake mpi c c++ mpi openmp)\namuse-huayno (missing features: amuse-framework gmake mpi c c++ mpi)\namuse-kepler (missing features: amuse-framework gmake mpi c++ mpi)\namuse-kepler-orbiters (missing features: amuse-framework gmake mpi c++ mpi)\namuse-krome (missing features: amuse-framework gmake mpi fortran download mpi)\namuse-mameclot (missing features: amuse-framework gmake mpi c mpi)\namuse-mercury (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mesa-r15140 (missing features: amuse-framework gmake mpi c c++ fortran cmake download mpi openmp hdf5)\namuse-mesa-r2208 (missing features: amuse-framework gmake mpi fortran download mpi openmp)\namuse-mi6 (missing features: amuse-framework gmake mpi c++ mpi)\namuse-mikkola (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mmams (missing features: amuse-framework gmake mpi c c++ cmake mpi gsl)\namuse-mobse (missing features: amuse-framework gmake mpi fortran mpi)\namuse-mocassin (missing features: amuse-framework gmake mpi fortran download mpi)\namuse-mosse (missing features: amuse-framework gmake mpi fortran mpi)
… (2871 more chars)
assistant · msg 16 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && ./setup install amuse-framework"})
tool · msg 17 
{"output": "Checking for dependencies, one moment please...\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nThe AMUSE framework cannot be installed because tools or dependencies are missing.\nPlease run ./setup and follow the instructions to enable it.", "exit_code": 1, "error": null}
assistant · msg 18 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && ./setup install all"})
tool · msg 19 
{"output": "Checking for dependencies, one moment please...\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nWARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nThe AMUSE framework cannot be installed because tools or dependencies are missing.\nPlease run ./setup and follow the instructions to enable it.", "exit_code": 1, "error": null}
assistant · msg 20 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install amuse-framework"})
tool · msg 21 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nCollecting amuse-framework\n  Downloading amuse_framework-2024.6.0.tar.gz (679 kB)\n     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 679.2/679.2 kB 2.3 MB/s  0:00:00\n  Installing build dependencies: started\n  Installing build dependencies: finished with status 'done'\n  Getting requirements to build wheel: started\n  Getting requirements to build wheel: finished with status 'done'\n  Preparing metadata (pyproject.toml): started\n  Preparing metadata (pyproject.toml): finished with status 'done'\nCollecting setuptools>=41.0.0 (from amuse-framework)\n  Downloading setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)\nCollecting setuptools_scm (from amuse-framework)\n  Downloading setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)\nRequirement already satisfied: pip>=19.0.0 in ./.venv/lib/python3.13/site-packages (from amuse-framework) (25.3)\nRequirement already satisfied: wheel>=0.32 in ./.venv/lib/python3.13/site-packages (from amuse-framework) (0.46.3)\nCollecting docutils>=0.6 (from amuse-framework)\n  Downloading docutils-0.22.4-py3-none-any.whl.metadata (15 kB)\nCollecting numpy>=1.2.2 (from amuse-framework)\n  Downloading numpy-2.4.4-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)\nCollecting pytest>=4.0 (from amuse-framework)\n  Downloading pytest-9.0.3-py3-none-any.whl.metadata (7.6 kB)\nCollecting h5py>=1.1.0 (from amuse-framework)\n  Downloading h5py-3.16.0-cp313-cp313-manylinux_2_28_x86_64.whl.metadata (3.0 kB)\nCollecting iniconfig>=1.0.1 (from pytest>=4.0->amuse-framework)\n  Downloading iniconfig-2.3.0-py3-none-any.whl.metadata (2.5 kB)\nRequirement already satisfied: packaging>=22 in ./.venv/lib/python3.13/site-packages (from pytest>=4.0->amuse-framework) (26.1)\nCollecting pluggy<2,>=1.5 (from pytest>=4.0->amuse-framework)\n  Downloading pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB)\nCollecting pygments>=2.7.2 (from pytest>=4.0->amuse-framework)\n  Downloading pygments-2.20.0-py3-none-any.whl.metadata (2.5 kB)\nCollecting vcs-versioning>=1.0.0.dev0 (from setuptools_scm->amuse-framework)\n  Downloading vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)\nDownloading docutils-0.22.4-py3-none-any.whl (633 kB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 633.2/633.2 kB 5.5 MB/s  0:00:00\nDownloading h5py-3.16.0-cp313-cp313-manylinux_2_28_x86_64.whl (5.4 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.4/5.4 MB 6.0 MB/s  0:00:00\nDownloading numpy-2.4.4-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.6 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.6/16.6 MB 4.4 MB/s  0:00:03\nDownloading pytest-9.0.3-py3-none-any.whl (375 kB)\nDownloading pluggy-1.6.0-py3-none-any.whl (20 kB)\nDownloading iniconfig-2.3.0-py3-none-any.whl (7.5 kB)\nDownloading pygments-2.20.0-py3-none-any.whl (1.2 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 4.1 MB/s  0:00:00\nDownloading setuptools-82.0.1-py3-none-any.whl (1.0 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.0/1.0 MB 3.8 MB/s  0:00:00\nDownloading setuptools_scm-10.0.5-py3-none-any.whl (21 kB)\nDownloading vcs_versioning-1.1.1-py3-none-any.whl (79 kB)\nBuilding wheels for collected packages: amuse-framework\n  Building wheel for amuse-framework (pyproject.toml): started\n  Building wheel for amuse-framework (pyproject.toml): finished with status 'error'\n  error: subprocess-exited-with-error\n  \n  × Building wheel for amuse-framework (pyproject.toml) did not run successfully.\n  │ exit code: 1\n  ╰─> [105 lines of output]\n      /tmp/pip-install-z4sr4ru9/amuse-framework_8c659147657a451b8a97084cfbf541ad/support/setup_codes.py:13: UserWarning: numpy needed during build; operation may fail\n        warnings.warn(\"numpy needed during build
… (7154 more chars)
assistant · msg 22 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install --upgrade pip"})
tool · msg 23 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nRequirement already satisfied: pip in ./.venv/lib/python3.13/site-packages (25.3)\nCollecting pip\n  Downloading pip-26.0.1-py3-none-any.whl.metadata (4.7 kB)\nDownloading pip-26.0.1-py3-none-any.whl (1.8 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 592.5 kB/s  0:00:02\nInstalling collected packages: pip\n  Attempting uninstall: pip\n    Found existing installation: pip 25.3\n    Uninstalling pip-25.3:\n      Successfully uninstalled pip-25.3\nSuccessfully installed pip-26.0.1", "exit_code": 0, "error": null}
assistant · msg 24 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install amuse-framework"})
tool · msg 25 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nCollecting amuse-framework\n  Downloading amuse_framework-2024.6.0.tar.gz (679 kB)\n     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 679.2/679.2 kB 941.8 kB/s  0:00:00\n  Installing build dependencies: started\n  Installing build dependencies: finished with status 'done'\n  Getting requirements to build wheel: started\n  Getting requirements to build wheel: finished with status 'done'\n  Preparing metadata (pyproject.toml): started\n  Preparing metadata (pyproject.toml): finished with status 'done'\nCollecting setuptools>=41.0.0 (from amuse-framework)\n  Downloading setuptools-82.0.1-py3-none-any.whl.metadata (6.5 kB)\nCollecting setuptools_scm (from amuse-framework)\n  Downloading setuptools_scm-10.0.5-py3-none-any.whl.metadata (6.5 kB)\nRequirement already satisfied: pip>=19.0.0 in ./.venv/lib/python3.13/site-packages (from amuse-framework) (26.0.1)\nRequirement already satisfied: wheel>=0.32 in ./.venv/lib/python3.13/site-packages (from amuse-framework) (0.46.3)\nCollecting docutils>=0.6 (from amuse-framework)\n  Downloading docutils-0.22.4-py3-none-any.whl.metadata (15 kB)\nCollecting numpy>=1.2.2 (from amuse-framework)\n  Downloading numpy-2.4.4-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)\nCollecting pytest>=4.0 (from amuse-framework)\n  Downloading pytest-9.0.3-py3-none-any.whl.metadata (7.6 kB)\nCollecting h5py>=1.1.0 (from amuse-framework)\n  Downloading h5py-3.16.0-cp313-cp313-manylinux_2_28_x86_64.whl.metadata (3.0 kB)\nCollecting iniconfig>=1.0.1 (from pytest>=4.0->amuse-framework)\n  Downloading iniconfig-2.3.0-py3-none-any.whl.metadata (2.5 kB)\nRequirement already satisfied: packaging>=22 in ./.venv/lib/python3.13/site-packages (from pytest>=4.0->amuse-framework) (26.1)\nCollecting pluggy<2,>=1.5 (from pytest>=4.0->amuse-framework)\n  Downloading pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB)\nCollecting pygments>=2.7.2 (from pytest>=4.0->amuse-framework)\n  Downloading pygments-2.20.0-py3-none-any.whl.metadata (2.5 kB)\nCollecting vcs-versioning>=1.0.0.dev0 (from setuptools_scm->amuse-framework)\n  Downloading vcs_versioning-1.1.1-py3-none-any.whl.metadata (1.6 kB)\nDownloading docutils-0.22.4-py3-none-any.whl (633 kB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 633.2/633.2 kB 2.5 MB/s  0:00:00\nDownloading h5py-3.16.0-cp313-cp313-manylinux_2_28_x86_64.whl (5.4 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.4/5.4 MB 1.5 MB/s  0:00:03\nDownloading numpy-2.4.4-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.6 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.6/16.6 MB 1.1 MB/s  0:00:15\nDownloading pytest-9.0.3-py3-none-any.whl (375 kB)\nDownloading pluggy-1.6.0-py3-none-any.whl (20 kB)\nDownloading iniconfig-2.3.0-py3-none-any.whl (7.5 kB)\nDownloading pygments-2.20.0-py3-none-any.whl (1.2 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 523.3 kB/s  0:00:02\nDownloading setuptools-82.0.1-py3-none-any.whl (1.0 MB)\n   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.0/1.0 MB 382.0 kB/s  0:00:02\nDownloading setuptools_scm-10.0.5-py3-none-any.whl (21 kB)\nDownloading vcs_versioning-1.1.1-py3-none-any.whl (79 kB)\nBuilding wheels for collected packages: amuse-framework\n  Building wheel for amuse-framework (pyproject.toml): started\n  Building wheel for amuse-framework (pyproject.toml): finished with status 'error'\n  error: subprocess-exited-with-error\n  \n  × Building wheel for amuse-framework (pyproject.toml) did not run successfully.\n  │ exit code: 1\n  ╰─> [105 lines of output]\n      /tmp/pip-install-q3jk48t_/amuse-framework_3f5548ee4ada4ea5a02565c5bfa28788/support/setup_codes.py:13: UserWarning: numpy needed during build; operation may fail\n        warnings.warn(\"numpy needed duri
… (7048 more chars)
assistant · msg 26 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && python3 -m pip install --no-build-isolation amuse-framework"})
tool · msg 27 
{"output": "WARNING: The directory '/root/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag.\nCollecting amuse-framework\n  Downloading amuse_framework-2024.6.0.tar.gz (679 kB)\n     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 679.2/679.2 kB 844.1 kB/s  0:00:00\n  Preparing metadata (pyproject.toml): started\n  Preparing metadata (pyproject.toml): finished with status 'done'\nERROR: Exception:\nTraceback (most recent call last):\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/base_command.py\", line 107, in _run_wrapper\n    status = _inner_run()\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/base_command.py\", line 98, in _inner_run\n    return self.run(options, args)\n           ~~~~~~~~^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/req_command.py\", line 96, in wrapper\n    return func(self, options, args)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/commands/install.py\", line 392, in run\n    requirement_set = resolver.resolve(\n        reqs, check_supported_wheels=not options.target_dir\n    )\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/resolver.py\", line 99, in resolve\n    result = self._result = resolver.resolve(\n                            ~~~~~~~~~~~~~~~~^\n        collected.requirements, max_rounds=limit_how_complex_resolution_can_be\n        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 601, in resolve\n    state = resolution.resolve(requirements, max_rounds=max_rounds)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 434, in resolve\n    self._add_to_criteria(self.state.criteria, r, parent=None)\n    ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 150, in _add_to_criteria\n    if not criterion.candidates:\n           ^^^^^^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/structs.py\", line 194, in __bool__\n    return bool(self._sequence)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 165, in __bool__\n    self._bool = any(self)\n                 ~~~^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 149, in <genexpr>\n    return (c for c in iterator if id(c) not in self._incompatible_ids)\n                       ^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 39, in _iter_built\n    candidate = func()\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/factory.py\", line 180, in _make_candidate_from_link\n    base: BaseCandidate | None = self._make_base_candidate_from_link(\n                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^\n        link, template, name, version\n        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/factory.py\", line 226, in _make_base_candidate_from_link\n    self._link_candidate_cache[link] = LinkCandidate(\n                                       ~~~~~~~~~~~~~^\n        link,\n        ^^^^^\n    ...<3 lines>...\n        version=version,\n        ^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/candidates.py\", line 318, in __init__\n    s
… (3732 more chars)
assistant · msg 28 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install --no-build-isolation --no-cache-dir amuse-framework"})
tool · msg 29 
{"output": "Collecting amuse-framework\n  Downloading amuse_framework-2024.6.0.tar.gz (679 kB)\n     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 679.2/679.2 kB 1.9 MB/s  0:00:00\n  Preparing metadata (pyproject.toml): started\n  Preparing metadata (pyproject.toml): finished with status 'done'\nERROR: Exception:\nTraceback (most recent call last):\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/base_command.py\", line 107, in _run_wrapper\n    status = _inner_run()\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/base_command.py\", line 98, in _inner_run\n    return self.run(options, args)\n           ~~~~~~~~^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/cli/req_command.py\", line 96, in wrapper\n    return func(self, options, args)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/commands/install.py\", line 392, in run\n    requirement_set = resolver.resolve(\n        reqs, check_supported_wheels=not options.target_dir\n    )\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/resolver.py\", line 99, in resolve\n    result = self._result = resolver.resolve(\n                            ~~~~~~~~~~~~~~~~^\n        collected.requirements, max_rounds=limit_how_complex_resolution_can_be\n        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 601, in resolve\n    state = resolution.resolve(requirements, max_rounds=max_rounds)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 434, in resolve\n    self._add_to_criteria(self.state.criteria, r, parent=None)\n    ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/resolvers/resolution.py\", line 150, in _add_to_criteria\n    if not criterion.candidates:\n           ^^^^^^^^^^^^^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_vendor/resolvelib/structs.py\", line 194, in __bool__\n    return bool(self._sequence)\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 165, in __bool__\n    self._bool = any(self)\n                 ~~~^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 149, in <genexpr>\n    return (c for c in iterator if id(c) not in self._incompatible_ids)\n                       ^^^^^^^^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py\", line 39, in _iter_built\n    candidate = func()\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/factory.py\", line 180, in _make_candidate_from_link\n    base: BaseCandidate | None = self._make_base_candidate_from_link(\n                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^\n        link, template, name, version\n        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/factory.py\", line 226, in _make_base_candidate_from_link\n    self._link_candidate_cache[link] = LinkCandidate(\n                                       ~~~~~~~~~~~~~^\n        link,\n        ^^^^^\n    ...<3 lines>...\n        version=version,\n        ^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/candidates.py\", line 318, in __init__\n    super().__init__(\n    ~~~~~~~~~~~~~~~~^\n        link=link,\n        ^^^^^^^^^^\n    ...<4 lines>...\n        version=version,\n        ^^^^^^^^^^^^^^^^\n    )\n    ^\n  File \"/app/amuse/.venv/lib/python3.13/site-packages/pip/_internal/resolution/resolvelib/ca
… (3471 more chars)
assistant · msg 30 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && python3 -m pip install --no-build-isolation --no-cache-dir -vvv amuse-framework"})
tool · msg 31 
{"output": "Using pip 26.0.1 from /app/amuse/.venv/lib/python3.13/site-packages/pip (python 3.13)\nNon-user install because user site-packages disabled\nCreated temporary directory: /tmp/pip-build-tracker-8im1pfz8\nInitialized build tracking at /tmp/pip-build-tracker-8im1pfz8\nCreated build tracker: /tmp/pip-build-tracker-8im1pfz8\nEntered build tracker: /tmp/pip-build-tracker-8im1pfz8\nCreated temporary directory: /tmp/pip-install-8m8ogr5r\nCreated temporary directory: /tmp/pip-ephem-wheel-cache-5ia90_re\n1 location(s) to search for versions of amuse-framework:\n* https://pypi.org/simple/amuse-framework/\nFetching project page and analyzing links: https://pypi.org/simple/amuse-framework/\nGetting page https://pypi.org/simple/amuse-framework/\nFound index url https://pypi.org/simple/\nStarting new HTTPS connection (1): pypi.org:443\nhttps://pypi.org:443 \"GET /simple/amuse-framework/ HTTP/1.1\" 200 6086\nFetched page https://pypi.org/simple/amuse-framework/ as application/vnd.pypi.simple.v1+json\n  Found link https://files.pythonhosted.org/packages/86/5f/d77461bacb11b7cf1630a61efc640698a7f045ebe86760492400f9d6ff17/amuse-framework-12.0.0rc1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc1\n  Found link https://files.pythonhosted.org/packages/ff/d0/636377dcabe62f25fe178bafa4d5d5ade0d20b965377509f45b9882f7cef/amuse-framework-12.0.0rc2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc2\n  Found link https://files.pythonhosted.org/packages/00/5f/b19442449331fcc880a2d3cde53cfab12dc43857f6f585c8fe72e9720393/amuse-framework-12.0.0rc3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc3\n  Found link https://files.pythonhosted.org/packages/dd/e4/f57d392ffa0896cf392fe4b3f90ab980aabe5b2dfe58a6e198de0eae99b3/amuse-framework-12.0.0rc4.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4\n  Found link https://files.pythonhosted.org/packages/ef/36/3012c313a0e47a5735ebb163743df66ed2480d241614668b202ab0e8c0dc/amuse-framework-12.0.0rc4.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4.post1\n  Found link https://files.pythonhosted.org/packages/03/07/e3131d025d95eb5216a99c11c4ed05f865cc83e89301668f73623e6eeeb1/amuse-framework-12.0.0rc5.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc5\n  Found link https://files.pythonhosted.org/packages/18/0b/d5cae9c9c7229135d9ec19377b85b61cf1644e0b0adbb032aa870fb18b74/amuse-framework-12.0.0rc6.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc6\n  Found link https://files.pythonhosted.org/packages/15/db/d40cee8cb2efd778ab21b17c16666334e949641ed0b036abe3dde070b8f5/amuse-framework-12.0.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0\n  Found link https://files.pythonhosted.org/packages/a6/63/4af7d218b10c3370fc2503955492cc5a7b1209d3645fab066de8f00b1417/amuse-framework-12.0.0.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0.post1\n  Found link https://files.pythonhosted.org/packages/fd/20/1d954fc492ff853ee071b5cfcea388f39edd6ee21c2a8b47d6fad384fc41/amuse-framework-12.0.1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.1\n  Found link https://files.pythonhosted.org/packages/44/72/addb8948c638b2978c75acaddc8d63017557463e3845d0bfbcebc50efa91/amuse-framework-12.0.2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.2\n  Found link https://files.pythonhosted.org/packages/11/9f/96b584b3e115c766e14ebfd50baa791f8b4e5c14232a32f71f32de84a28e/amuse-framework-12.0.3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.3\n  Found link https://files.pythonhosted.org/packages/0f/40/1910a50bdeab6d0812a867b1998dd1a21f00c6efb97deb2f655b78636b66/amuse-framework-12.1.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.1.0\n  Found link https://files.pythonhosted.org/packages/23/b5/5e91e791a1948b87fdb00c450fb0851bbcf7dbbe321f2e203ea93ae
… (46538 more chars)
assistant · msg 32 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && python3 -m pip install --no-build-isolation --no-cache-dir -vvv amuse-framework==2023.10.0"})
tool · msg 33 
{"output": "Using pip 26.0.1 from /app/amuse/.venv/lib/python3.13/site-packages/pip (python 3.13)\nNon-user install because user site-packages disabled\nCreated temporary directory: /tmp/pip-build-tracker-u1ki0izw\nInitialized build tracking at /tmp/pip-build-tracker-u1ki0izw\nCreated build tracker: /tmp/pip-build-tracker-u1ki0izw\nEntered build tracker: /tmp/pip-build-tracker-u1ki0izw\nCreated temporary directory: /tmp/pip-install-iw9bzzh2\nCreated temporary directory: /tmp/pip-ephem-wheel-cache-2krppm95\n1 location(s) to search for versions of amuse-framework:\n* https://pypi.org/simple/amuse-framework/\nFetching project page and analyzing links: https://pypi.org/simple/amuse-framework/\nGetting page https://pypi.org/simple/amuse-framework/\nFound index url https://pypi.org/simple/\nStarting new HTTPS connection (1): pypi.org:443\nhttps://pypi.org:443 \"GET /simple/amuse-framework/ HTTP/1.1\" 200 6086\nFetched page https://pypi.org/simple/amuse-framework/ as application/vnd.pypi.simple.v1+json\n  Found link https://files.pythonhosted.org/packages/86/5f/d77461bacb11b7cf1630a61efc640698a7f045ebe86760492400f9d6ff17/amuse-framework-12.0.0rc1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc1\n  Found link https://files.pythonhosted.org/packages/ff/d0/636377dcabe62f25fe178bafa4d5d5ade0d20b965377509f45b9882f7cef/amuse-framework-12.0.0rc2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc2\n  Found link https://files.pythonhosted.org/packages/00/5f/b19442449331fcc880a2d3cde53cfab12dc43857f6f585c8fe72e9720393/amuse-framework-12.0.0rc3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc3\n  Found link https://files.pythonhosted.org/packages/dd/e4/f57d392ffa0896cf392fe4b3f90ab980aabe5b2dfe58a6e198de0eae99b3/amuse-framework-12.0.0rc4.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4\n  Found link https://files.pythonhosted.org/packages/ef/36/3012c313a0e47a5735ebb163743df66ed2480d241614668b202ab0e8c0dc/amuse-framework-12.0.0rc4.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4.post1\n  Found link https://files.pythonhosted.org/packages/03/07/e3131d025d95eb5216a99c11c4ed05f865cc83e89301668f73623e6eeeb1/amuse-framework-12.0.0rc5.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc5\n  Found link https://files.pythonhosted.org/packages/18/0b/d5cae9c9c7229135d9ec19377b85b61cf1644e0b0adbb032aa870fb18b74/amuse-framework-12.0.0rc6.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc6\n  Found link https://files.pythonhosted.org/packages/15/db/d40cee8cb2efd778ab21b17c16666334e949641ed0b036abe3dde070b8f5/amuse-framework-12.0.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0\n  Found link https://files.pythonhosted.org/packages/a6/63/4af7d218b10c3370fc2503955492cc5a7b1209d3645fab066de8f00b1417/amuse-framework-12.0.0.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0.post1\n  Found link https://files.pythonhosted.org/packages/fd/20/1d954fc492ff853ee071b5cfcea388f39edd6ee21c2a8b47d6fad384fc41/amuse-framework-12.0.1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.1\n  Found link https://files.pythonhosted.org/packages/44/72/addb8948c638b2978c75acaddc8d63017557463e3845d0bfbcebc50efa91/amuse-framework-12.0.2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.2\n  Found link https://files.pythonhosted.org/packages/11/9f/96b584b3e115c766e14ebfd50baa791f8b4e5c14232a32f71f32de84a28e/amuse-framework-12.0.3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.3\n  Found link https://files.pythonhosted.org/packages/0f/40/1910a50bdeab6d0812a867b1998dd1a21f00c6efb97deb2f655b78636b66/amuse-framework-12.1.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.1.0\n  Found link https://files.pythonhosted.org/packages/23/b5/5e91e791a1948b87fdb00c450fb0851bbcf7dbbe321f2e203ea93ae
… (46538 more chars)
assistant · msg 34 1 tool call 
terminal({"command": "cd /app/amuse && source .venv/bin/activate && pip install --no-build-isolation --no-cache-dir -vvv amuse-framework==2023.10.0 --no-deps"})
tool · msg 35 
{"output": "Using pip 26.0.1 from /app/amuse/.venv/lib/python3.13/site-packages/pip (python 3.13)\nNon-user install because user site-packages disabled\nCreated temporary directory: /tmp/pip-build-tracker-si2n8g26\nInitialized build tracking at /tmp/pip-build-tracker-si2n8g26\nCreated build tracker: /tmp/pip-build-tracker-si2n8g26\nEntered build tracker: /tmp/pip-build-tracker-si2n8g26\nCreated temporary directory: /tmp/pip-install-uievm6_i\nCreated temporary directory: /tmp/pip-ephem-wheel-cache-3gwy4bj0\n1 location(s) to search for versions of amuse-framework:\n* https://pypi.org/simple/amuse-framework/\nFetching project page and analyzing links: https://pypi.org/simple/amuse-framework/\nGetting page https://pypi.org/simple/amuse-framework/\nFound index url https://pypi.org/simple/\nStarting new HTTPS connection (1): pypi.org:443\nhttps://pypi.org:443 \"GET /simple/amuse-framework/ HTTP/1.1\" 200 6086\nFetched page https://pypi.org/simple/amuse-framework/ as application/vnd.pypi.simple.v1+json\n  Found link https://files.pythonhosted.org/packages/86/5f/d77461bacb11b7cf1630a61efc640698a7f045ebe86760492400f9d6ff17/amuse-framework-12.0.0rc1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc1\n  Found link https://files.pythonhosted.org/packages/ff/d0/636377dcabe62f25fe178bafa4d5d5ade0d20b965377509f45b9882f7cef/amuse-framework-12.0.0rc2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc2\n  Found link https://files.pythonhosted.org/packages/00/5f/b19442449331fcc880a2d3cde53cfab12dc43857f6f585c8fe72e9720393/amuse-framework-12.0.0rc3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc3\n  Found link https://files.pythonhosted.org/packages/dd/e4/f57d392ffa0896cf392fe4b3f90ab980aabe5b2dfe58a6e198de0eae99b3/amuse-framework-12.0.0rc4.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4\n  Found link https://files.pythonhosted.org/packages/ef/36/3012c313a0e47a5735ebb163743df66ed2480d241614668b202ab0e8c0dc/amuse-framework-12.0.0rc4.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc4.post1\n  Found link https://files.pythonhosted.org/packages/03/07/e3131d025d95eb5216a99c11c4ed05f865cc83e89301668f73623e6eeeb1/amuse-framework-12.0.0rc5.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc5\n  Found link https://files.pythonhosted.org/packages/18/0b/d5cae9c9c7229135d9ec19377b85b61cf1644e0b0adbb032aa870fb18b74/amuse-framework-12.0.0rc6.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0rc6\n  Found link https://files.pythonhosted.org/packages/15/db/d40cee8cb2efd778ab21b17c16666334e949641ed0b036abe3dde070b8f5/amuse-framework-12.0.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0\n  Found link https://files.pythonhosted.org/packages/a6/63/4af7d218b10c3370fc2503955492cc5a7b1209d3645fab066de8f00b1417/amuse-framework-12.0.0.post1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.0.post1\n  Found link https://files.pythonhosted.org/packages/fd/20/1d954fc492ff853ee071b5cfcea388f39edd6ee21c2a8b47d6fad384fc41/amuse-framework-12.0.1.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.1\n  Found link https://files.pythonhosted.org/packages/44/72/addb8948c638b2978c75acaddc8d63017557463e3845d0bfbcebc50efa91/amuse-framework-12.0.2.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.2\n  Found link https://files.pythonhosted.org/packages/11/9f/96b584b3e115c766e14ebfd50baa791f8b4e5c14232a32f71f32de84a28e/amuse-framework-12.0.3.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.0.3\n  Found link https://files.pythonhosted.org/packages/0f/40/1910a50bdeab6d0812a867b1998dd1a21f00c6efb97deb2f655b78636b66/amuse-framework-12.1.0.tar.gz (from https://pypi.org/simple/amuse-framework/), version: 12.1.0\n  Found link https://files.pythonhosted.org/packages/23/b5/5e91e791a1948b87fdb00c450fb0851bbcf7dbbe321f2e203ea93ae
… (46538 more chars)